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Table 1 Criteria and tests of clonality (after 10)

From: Genetic subdivisions within Trypanosoma cruzi(Discrete Typing Units) and their relevance for molecular epidemiology and experimental evolution

Criterion

Description

Segregation (within locus)

 

   a

Fixed heterozygosity *

   b

Absence of segregation genotypes *

   c

Deviation from Hardy-Weinberg expectation

Recombination (beween loci)

 

   d

Overrepresented, identical genotypes widespread * (statistical tests d1 ** # and d2 ** §

   e

Absence of recombinant genotypes ** §/P>

   f

Linkage disequilibrium ** §/P>

   g

Correlation between two independent sets of genetic markers ** §P

  1. * = used qualitatively, without statistical calculations; ** = used with statistical calculations. # Combinatorial analysis §Monte Carlo simulation with 104 iterations ¶Mantel nonparametric test of correlation between genetic distances obtained from different markers